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Maniatis, G., Tani, E., Katsileros, A., Avramidou, E.V., Pitsoli, T., Sarri, E., Gerakari, M., Goufa, M., Panagoulakou, M., Xipolitaki, K., Klouvatos, K., Megariti, S., Pappi, P., Papadakis, I.E., Bebeli, P.J., Kapazoglou, A. Genetic and Epigenetic Responses of Autochthonous Grapevine Cultivars from the ‘Epirus’ Region of Greece upon Consecutive Drought Stress (2024) 13 (1), art. no. 27, .

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Tani, E., Chronopoulou, E.G., Labrou, N.E., Sarri, E., Goufa, M., Vaharidi, X., Tornesaki, A., Psychogiou, M., Bebeli, P.J., Abraham, E.M. Growth, Physiological, Biochemical, and Transcriptional Responses to Drought Stress in Seedlings of Medicago sativa L., Medicago arborea L. And their hybrid (Alborea) (2019) Agronomy, 9 (1), art. no. 38, .

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Ventouris, Y.E., Tani, E., Avramidou, E.V., Abraham, E.M., Chorianopoulou, S.N., Vlachostergios, D.N., Papadopoulos, G., Kapazoglou, A. Recurrent water deficit and epigenetic memory in medicago sativa L. Varieties (2020) Applied Sciences (Switzerland), 10 (9), art. no. 3110, .

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Varotto, S., Tani, E., Abraham, E., Krugman, T., Kapazoglou, A., Melzer, R., Radanoviæ, A., Miladinoviæ, D. Epigenetics: Possible applications in climate-smart crop breeding (2020) Journal of Experimental Botany, 71 (17), pp. 5223-5236.

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Kapazoglou, A., Tani, E., Avramidou, E.V., Abraham, E.M., Gerakari, M., Megariti, S., Doupis, G., Doulis, A.G. Epigenetic Changes and Transcriptional Reprogramming Upon Woody Plant Grafting for Crop Sustainability in a Changing Environment (2021) Frontiers in Plant Science, 11, art. no. 613004, .

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Sarri, E., Termentzi, A., Abraham, E.M., Papadopoulos, G.K., Baira, E., Machera, K., Loukas, V., Komaitis, F., Tani, E. Salinity stress alters the secondary metabolic profile of M. Sativa, M. Arborea and their hybrid (alborea) (2021) International Journal of Molecular Sciences, 22 (9), art. no. 4882, .

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Mladenov, V., Fotopoulos, V., Kaiserli, E., Karalija, E., Maury, S., Baranek, M., Segal, N., Testillano, P.S., Vassileva, V., Pinto, G., Nagel, M., Hoenicka, H., Miladinović, D., Gallusci, P., Vergata, C., Kapazoglou, A., Abraham, E., Tani, E., Gerakari, M., Sarri, E., Avramidou, E., Gašparović, M., Martinelli, F. Deciphering the epigenetic alphabet involved in transgenerational stress memory in crops (2021) International Journal of Molecular Sciences, 22 (13), art. no. 7118, .

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Gerakari, M., Cheimona, N., Tani, E., Travlos, I., Chachalis, D., Loddo, D., Mathiassen, S.K., Gitsopoulos, T.K., Scarabel, L., Panozzo, S., Kristensen, M., Kudsk, P., Sattin, M. Biochemical and rapid molecular analyses to identify glyphosate resistance in lolium spp. (2022) Agronomy, 12 (1), art. no. 40, .

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Kapazoglou, A., Gerakari, M., Lazaridi, E., Kleftogianni, K., Sarri, E., Tani, E., Bebeli, P.J. Crop Wild Relatives: A Valuable Source of Tolerance to Various Abiotic Stresses (2023) Plants, 12 (2), art. no. 328, .

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Katsileros A., Antonetsis N., Gkika M., Tani E., Tokatlidis I. and P. Bebeli. (2023). Software Impacts. doi.org/10.1016/j.simpa.2023.100490

Katsileros A., Antonetsis N., Mouzaidis P.,  Tani E., Bebeli P.J., Karagrigoriou A. (2024). A Comparison of Tests for Homoscedasticity Using Simulation and Empirical Data.  Communications for Statistical Applications and Methods, 31, 1–35.

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Zhou, J., Stringlis, I.A., Wen, J., Liu, Y., Xu, S., and Wang, R.Interplay between Amaryllidaceae alkaloids, the bacteriome and phytopathogens in Lycoris radiata (2023) New Phytologist, in press.

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Fragkiadaki, V., Lazaridi, E., Suso, M.J., Tsagkarakis, A., Ortiz-Sánchez, F.J., Bebeli, P.J.(2023). The Relation between Flower Traits of Bitter Vetch Landraces and Potential Insect Pollinators’ Visitation. Ecologies, 4 (3), pp. 595-613. 

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Xylogianni, E., Margaria, P., Knierim, D., Sareli, K., Winter, S., Chatzivassiliou, E.K. Virus surveys in olive orchards in greece identify olive virus T, a novel member of the genus tepovirus (2021) Pathogens, 10 (5), art. no. 574, .

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Chatzivassiliou, E.K. An annotated list of legume-infecting viruses in the light of metagenomics (2021) Plants, 10 (7), art. no. 1413.

http://www.doi.org/10.3390/plants10071413

Sareli, K., Winter, S., Chatzivassiliou, E.Κ., Knierim, D., Margaria, P. High molecular diversity of full-length genome sequences of zucchini yellow fleck virus from Europe (2022) Archives of Virology, 167 (11), pp. 2305-2310.

http://www.doi.org/10.1007/s00705-022-05558-9

Valachas, C.A., Giantsis, I.A., Sareli, K., Winter, S., Zelezniakof, E., Pentheroudaki, Z., Chatzivassiliou, E.K. Molecular analysis of Greek isolates of cucumber mosaic virus from vegetables shows a low prevalence of satellite RNAs and suggests the presence of host-associated virus strains (2021) Archives of Virology, 166 (8), pp. 2199-2208.

http://www.doi.org/10.1007/s00705-021-05115-w

Giakountis, A., Tsarmpopoulos, I., Chatzivassiliou, E.K. Cucumber mosaic virus isolates from Greek legumes are associated with satellite RNAs that are necrogenic for tomato (2018) Plant Disease, 102 (11), pp. 2268-2276.

http://www.doi.org/10.1094/pdis-08-17-1259-re

Bragard, C., Baptista, P.,Chatzivassiliou, E., Gonthier, P., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P.,Navas-Cortes, J.A., Parnell, S., Potting, R., Stefani, E., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J.,Zappala, L., Carluccio, AV., Chiumenti, M., Di Serio, F., Rubino, L., Maiorano, A., Pautasso, M., Reignault, P.L., EFSA PLH Panel (EFSA Panel on Plant Health) Scientific Opinion on the pest categorisation of coconut cadang-cadang viroid (2023) EFSA Journal, 21(5):8021, 21 pp.

https://doi.org/10.2903/j.efsa.2023.8021

Bragard, C., Baptista, P.,Chatzivassiliou, E., Di Serio, F., Gonthier, P., Miret, J. A. J., Justesen, A. F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J. A., Parnell, S., Potting, R., Stefani, E., Thulke, H.-H., Van der Werf, W.,Vicent Civera, A., Yuen, J., Zappala, L.,Reignault, P. L. EFSA PLH Panel (EFSA Panel on Plant Health) Scientific Opinion on the pest categorisation of the avocado sunblotch viroid (2023) EFSA Journal, 21(7), 1–25.

https://doi.org/10.2903/j.efsa.2023.8116

Chatzivassiliou, E.K., Licciardello, G. Assessment of Genetic Variability of Citrus tristeza virus by SSCP and CE-SSCP (2019) Methods in Molecular Biology, 2015, pp. 79-104.

http://www.doi.org/10.1007/978-1-4939-9558-5_7

Bragard, C., Dehnen-Schmutz, K., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Finelli, F., MacFarlane, S., Winter, S., Bosco, D., Chiumenti, M., Di Serio, F., Kaluski, T., Minafra, A., Rubino, L., EFSA Panelon Plant Health (PLH) Pest categorisation of non-EU viruses of Fragaria L. (2019) EFSA Journal, 17 (9), art. no. e05766.

http://www.doi.org/10.2903/j.efsa.2019.5766

Bragard, C., Dehnen-Schmutz, K., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Finelli, F., Martelli, G.P., Winter, S., Bosco, D., Chiumenti, M., Di Serio, F., Kaluski, T., Minafra, A., Rubino, L., EFSA Panelon Plant Health (EFSA PLH Panel) Pest categorisation of non-EU viruses and viroids of Vitis L (2019) EFSA Journal, 17 (9), art. no. e05669.

http://www.doi.org/10.2903/j.efsa.2019.5669

Bragard, C., Dehnen-Schmutz, K., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Finelli, F., Winter, S., Chiumenti, M., Di Serio, F., Kaluski, T., Minafra, A., Rubino, L., EFSA Panelon Plant Health (PLH) Pest categorisation of non-EU viruses and viroids of Cydonia Mill., Malus Mill. and Pyrus L. (2019) EFSA Journal, 17 (9), art. no. e05590.

http://www.doi.org/10.2903/j.efsa.2019.5590

Bragard, C., Dehnen-Schmutz, K., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Werf, W.V.D., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Winter, S., Chiumenti, M., Di Serio, F., Kaluski, T., Minafra, A., Rubino, L., EFSA Panelon Plant Health (PLH) List of non-EU viruses and viroids of Cydonia Mill., Fragaria L., Malus Mill., Prunus L., Pyrus L., Ribes L., Rubus L. and Vitis L. (2019) EFSA Journal, 17 (9), art. no. e05501.

http://www.doi.org/10.2903/j.efsa.2019.5501

Chatzivassiliou, E.K., Papapanagiotou, A.P., Mpenardis, P.D., Perdikis, D.C., Menexes, G. Transmission of Moroccan watermelon mosaic virus (MWMV) by aphids in Greece (2016) Plant Disease, 100 (3), pp. 601-606.

http://www.doi.org/10.1094/PDIS-07-15-0805-RE

Chatzivassiliou, E.K., Giakountis, A., Kumari, S.G., Makkouk, K.M. Viruses affecting lentil (Lens culinaris Medik.) in Greece; incidence and genetic variability of Bean leafroll virus and Pea enation mosaic virus (2016) Phytopathologia Mediterranea, 55 (2), pp. 239-252.

http://www.doi.org/10.14601/Phytopathol_Mediterr-17866

Giakountis, A., Skoufa, A., Paplomatas, E.I., Tokatlidis, I.S., Chatzivassiliou, E.K. Molecular characterization and phylogenetic analysis of a Greek lentil isolate of Pea seed-borne mosaic virus (2015) Phytoparasitica, 43 (5), pp. 615-628.

http://www.doi.org/10.1007/s12600-015-0495-9

Kargiotidou, A., Chatzivassiliou, E., Tzantarmas, C., Sinapidou, E., Papageorgiou, A., Skaracis, G.N., Tokatlidis, I.S. Selection at ultra-low density identifies plants escaping virus infection and leads towards high-performing lentil (Lens culinaris L.) varieties (2014) Journal of Agricultural Science, 152 (5), pp. 749-758.

http://www.doi.org/10.1017/S0021859613000403

Chatzivassiliou, E.K., Nolasco, G. Detection of a new variant of Citrus tristeza virus in Greek citrus crops (2014) Phytopathologia Mediterranea, 53 (1), pp. 140-147.

http://www.doi.org/10.14601/Phytopathol_Mediterr-12910

Katis, N.I., Chatzivassiliou, E.K., Clay, C.M., Maliogka, V.I., Pappi, P., Efthimiou, K., Dovas, C.I., Avgelis, A.D. Development of an IC-RT-PCR assay for the detection of Eggplant mottled dwarf virus and partial characterization of isolates from various hosts in Greece (2011) Journal of Plant Pathology, 93 (2), pp. 353-362.

https://www.jstor.org/stable/41999006

Bragard, C., Dehnen-Schmutz, K., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Finelli, F., Winter, S., Bosco, D., Chiumenti, M., Di Serio, F., Kaluski, T., Minafra, A., Rubino, L., EFSA Panelon Plant Health (PLH) Pest categorisation of non-EU viruses and viroids of Prunus L. (2019) EFSA Journal, 17 (9), art. no. e05735.

https://www.doi.org/10.2903/j.efsa.2019.5735

Bragard, C., Dehnen-Schmutz, K., Di Serio, F., Gonthier, P., Jacques, M.-A., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Candresse, T., Chatzivassiliou, E., Winter, S., Bottex, B. Pest categorisation of tomato leaf curl New Delhi virus (2020) EFSA Journal, 18 (7), art. no. e06179.

http://www.doi.org/10.2903/j.efsa.2020.6179

Chatzivassiliou, E.K. Management of the spread of Tomato spotted wilt virus in tobacco crops with insecticides based on estimates of thrips infestation and virus incidence (2008) Plant Disease, 92 (7), pp. 1012-1020.

http://www.doi.org/10.1094/PDIS-92-7-1012

Chatzivassiliou, E.K., Peters, D., Katis, N.I. The role of weeds in the spread of Tomato spotted wilt virus by Thrips tabaci (Thysanoptera: Thripidae) in tobacco crops (2007) Journal of Phytopathology, 155 (11-12), pp. 699-705.

http://www.doi.org/10.1111/j.1439-0434.2007.01302.x

Bragard, C., Baptista, P., Chatzivassiliou, E., Di Serio, F., Gonthier, P., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Stefani, E., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Dehnen-Schmutz, K., Migheli, Q., Vloutoglou, I., Streissl, F., Chiumenti, M., Di Serio, F., Rubino, L., Reignault, P.L., EFSA Panel on Plant Health (PLH) Pest categorisation of High Plains wheat mosaic virus (2022) EFSA Journal, 20 (5), art. no. e07302.

http://www.doi.org/10.2903/j.efsa.2022.7302

Brunner, P.C., Chatzivassiliou, E.K., Katis, N.I., Frey, J.E. Host-associated genetic differentiation in Thrips tabaci (Insecta; Thysanoptera), as determined from mtDNA sequence data (2004) Heredity, 93 (4), pp. 364-370.

http://www.doi.org/10.1038/sj.hdy.6800512

Chatzivassiliou, E.K., Peters, D., Katis, N.I. The efficiency by which Thrips tabaci populations transmit Tomato spotted wilt virus depends on their host preference and reproductive strategy (2002) Phytopathology, 92 (6), pp. 603-609.

http://www.doi.org/10.1094/PHYTO.2002.92.6.603

Chatzivassiliou, E.K., Boubourakas, I., Drossos, E., Eleftherohorinos, I., Jenser, G., Peters, D., Katis, N.I. Weeds in greenhouses and tobacco fields are differentially infected by Tomato spotted wilt virus and infested by its vector species (2001) Plant Disease, 85 (1), pp. 40-46.

http://www.doi.org/10.1094/PDIS.2001.85.1.40

Chatzivassiliou, E.K., Weekes, R., Morris, J., Wood, K.R., Barker, I., Katis, N.I. Tomato spotted wilt virus (TSWV) in greece: Its incidence following the expansion of Frankliniella occidentalis, and characterisation of isolates collected from various hosts (2000) Annals of Applied Biology, 137 (2), pp. 127-134.

http://www.doi.org/10.1111/j.1744-7348.2000.tb00044.x

Vlachostergios, D.N., Tzantarmas, C., Kargiotidou, A., Ninou, E., Pankou, C., Gaintatzi, C., Mylonas, I., Papadopoulos, I., Foti, C., Chatzivassiliou, E.K., Sinapidou, E., Lithourgidis, A., Tokatlidis, I.S. Single-plant selection within lentil landraces at ultra-low density: a short-time tool to breed high yielding and stable varieties across divergent environments (2018) Euphytica, 214 (3), art. no. 58.

http://www.doi.org/10.1007/s10681-018-2139-x

Bragard, C., Baptista, P., Chatzivassiliou, E., Gonthier, P., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Reignault, P.L., Stefani, E., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Dehnen-Schmutz, K., Migheli, Q., Vloutoglou, I., Czwienczek, E., Streissl, F., Carluccio, A.V., Chiumenti, M., Di Serio, F., Rubino, L., Reignault, P.L., EFSA Panel on Plant Health (PLH) Pest categorisation of Capsicum chlorosis virus (2022) EFSA Journal, 20 (6), art. no. e07337, .

http://www.doi.org/10.2903/j.efsa.2022.7337

Bragard, C., Baptista, P., Chatzivassiliou, E., Di Serio, F., Gonthier, P., Jaques Miret, J.A., Justesen, A.F., MacLeod, A., Magnusson, C.S., Milonas, P., Navas-Cortes, J.A., Parnell, S., Potting, R., Stefani, E., Thulke, H.-H., Van der Werf, W., Vicent Civera, A., Yuen, J., Zappalà, L., Migheli, Q., Vloutoglou, I., Czwienczek, E., Streissl, F., Carluccio, A.V., Chiumenti, M., Di Serio, F., Rubino, L., Reignault, P.L., EFSA Panel on Plant Health (PLH) Pest categorisation of chickpea chlorotic dwarf virus (2022) EFSA Journal, 20 (11), art. no. e07625, .

http://www.doi.org/10.2903/j.efsa.2022.7625

Biniari, K., Xenaki, M., Daskalakis, I., Rusjan, D., Bouza, D., Stavrakaki, M. Polyphenolic compounds and antioxidants of skin and berry grapes of Greek Vitis vinifera cultivars in relation to climate conditions (2020) Food Chemistry, 307, 125518.

https://doi.org/10.1016/j.foodchem.2019.125518

Stavrakaki, M., Bouza, D. and Biniari, K. Differentiation of Greek grapevine cultivars (Vitis vinifera L.) based on the combination of ampelographic description and microsatellite markers (2020) Genetic Resources and Crop Evolution, 67(1), 21-40.

https://doi.org/10.1007/s10722-019-00860-z

Daskalakis, I., Stavrakaki, M., Sotirakogloy, K., Biniari, K. Variations in the levels of individual phenolic compounds in grapevine latent buds during eco-dormancy, following chemically-induced stress conditions (2021) Agronomy, 11(9), 1798.

https://doi.org/10.3390/agronomy11091798

Papadakis, I.E., Antonopoulou, C., Sotiropoulos, T., Chatzissavvidis, C., Therios, I. Effect of Magnesium on Mineral Nutrition, Chlorophyll, Proline and Carbohydrate Concentrations of Sweet Orange (Citrus sinensis cv. Newhall) Plants (2023) Applied Sciences,13(14):7995.

https://doi.org/10.3390/app13147995

Sotiropoulos, S., Chatzissavvidis, C., Papadakis, I., Kavvadias, V., Paschalidis, C., Antonopoulou, C., Koriki, A. Inorganic and organic foliar fertilization in olives (2023) Horticultural Science, 50 (1), pp. 1-11.

https://doi.org/10.17221/69/2022-HORTSCI

Chatzistathis, T., Chatzissavvidis, C., Papaioannou, A., Papadakis, I.E. Independent or Combinational Application of Sheep Manure and Litter from Indigenous Field Vegetation of Quercus sp. Influences Nutrient Uptake, Photosynthesis, Intrinsic Water Use Efficiency, and Foliar Sugar Concentrations in Olive Plants (Olea europaea L., cv. “Koroneiki”) (2023) Applied Sciences (Switzerland), 13 (2), art. no. 1127.

https://doi.org/10.3390/app13021127